Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs1808308 chr7:76138967 C/G 0.000249 119 40.67 45.87 28.43 KM Plot
THYM rs180904590 chr7:29723373 C/A 3.55E-13 119 37.63 48.18 6 KM Plot
THYM rs181245480 chr21:44064717 C/T 0.000133 116 39.75 42.9 28.43 KM Plot
THYM rs183270497 chr3:49479704 C/T 2.94E-8 114 41.22 35 12.63 KM Plot
THYM rs184172684 chr3:52970504 C/CT 0.000223 119 42.9 23.75 25.63 KM Plot
THYM rs1842405 chr8:50220007 C/T 6.06E-10 119 46.43 50.1 26.52 KM Plot
THYM rs1845539 chr4:70293828 G/A 6.15E-13 118 41.77 42.3 6 KM Plot
THYM rs184777054 chr9:97135905 T/G 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs1848541 chr8:50090255 T/C 4.63E-10 117 46.27 50.1 25.83 KM Plot
THYM rs1849548 chr1:227437341 T/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs185992886 chr20:29526639 C/T 2.67E-13 118 38.13 50.53 6 KM Plot
THYM rs1861104 chr7:76138845 T/C 0.000249 119 40.67 45.87 28.43 KM Plot
THYM rs1861105 chr7:76138835 C/T 0.000249 119 40.67 45.87 28.43 KM Plot
THYM rs186154987 chr4:115549538 C/A 0 118 38.23 46.27 4.13 KM Plot
THYM rs1862450 chr16:24856775 A/G 2.87E-6 119 31.37 28 45.87 KM Plot